STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1863ABC transporter, permease component. (270 aa)    
Predicted Functional Partners:
EIO_1862
ABC transporter ATP-binding protein.
 
 
 0.966
EIO_1864
ABC transporter substrate-binding protein, putative.
 
 
  0.950
EIO_1861
Putative transport system permease abc transporter protein.
 
    
0.842
EIO_1860
Fumarylpyruvate hydrolase.
 
    0.828
EIO_2647
ABC transporter related protein.
 
 
 0.778
EIO_1865
Regulatory protein, GntR:Bacterial regulatory protein, GntR.
 
     0.772
EIO_0148
Binding-protein-dependent transport systems inner membrane component.
  
     0.758
EIO_1421
ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component.
 
 
 0.751
EIO_2067
ABC transporter related protein.
 
 
 0.749
EIO_1576
ABC transporter ATP-binding protein.
 
 
 0.731
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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