STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1872HTH-type transcriptional regulator aglR. (354 aa)    
Predicted Functional Partners:
EIO_2430
Glutamine-pyruvate aminotransferase.
    
 
 0.839
EIO_1873
Beta-glucosidase.
 
   
 0.833
EIO_1871
Extracellular solute-binding protein.
 
   
 0.826
aglK
ABC alpha-glucoside transporter, inner membrane subunit AglF.
 
    0.797
EIO_1868
Alpha amylase catalytic region.
 
  
 0.777
EIO_1869
Binding-protein-dependent transport systems inner membrane component.
 
   
 0.774
EIO_1039
Transcriptional regulator protein.
  
     0.768
EIO_1867
ABC transporter related protein.
 
  
 0.616
EIO_0216
Phosphocarrier protein HPr.
   
 
 0.603
fggY
Carbohydrate kinase FGGY.
 
 
 
 0.425
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.