STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1900Binding-protein-dependent transport systems inner membrane component. (312 aa)    
Predicted Functional Partners:
EIO_1901
Putative substrate-binding lipoprotein.
 
  0.996
EIO_1899
Binding-protein-dependent transport systems inner membrane component.
  0.973
EIO_1902
ABC transporter related protein.
 
  0.948
EIO_1046
Sugar ABC transporter, (sugar-binding protein).
 
 0.917
EIO_1048
Binding-protein-dependent transport systems inner membrane component.
 0.902
EIO_2083
ATP-binding transport protein smoK.
 
  0.900
EIO_0516
Sugar ABC transporter, permease protein, ThuG.
  0.899
EIO_0518
ABC transporter related protein.
 
  0.898
EIO_2661
ATP-binding protein, ABC-type glycerol-3-phosphate transporter.
 
  0.897
EIO_2484
Binding-protein-dependent transport systems inner membrane component.
  0.896
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.