STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1902ABC transporter related protein. (360 aa)    
Predicted Functional Partners:
EIO_1899
Binding-protein-dependent transport systems inner membrane component.
 
 0.963
EIO_1900
Binding-protein-dependent transport systems inner membrane component.
 
 0.948
EIO_1048
Binding-protein-dependent transport systems inner membrane component.
 
 0.906
EIO_1047
Sugar ABC transporter, permease protein, putative.
 
 0.902
EIO_2484
Binding-protein-dependent transport systems inner membrane component.
 0.897
EIO_0516
Sugar ABC transporter, permease protein, ThuG.
 
 0.896
EIO_2081
Binding-protein-dependent transport systems inner membrane component.
 0.888
EIO_0515
Sugar-binding transport system permease protein.
 
 0.886
yurN
Probable sugar ABC transporter, permease protein.
 
 0.885
EIO_1933
Binding-protein-dependent transport systems inner membrane component.
 
 0.826
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.