STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1949Binding-protein-dependent transport systems inner membrane component. (340 aa)    
Predicted Functional Partners:
EIO_1950
Binding-protein-dependent transport systems inner membrane component.
 
  0.963
EIO_1951
Extracellular solute-binding protein.
 
  0.880
EIO_2673
Oligopeptide ABC transporter (permease).
 
 
  0.849
EIO_1448
Oligopeptide/dipeptide ABC transporter ATP-binding protein.
 
  0.845
EIO_1798
ABC transporter permease.
 
 
  0.844
EIO_0740
ABC transporter permease protein.
 
 
  0.842
EIO_1438
Binding-protein-dependent transport systems inner membrane component.
 
 
  0.830
EIO_1496
Binding-protein-dependent transport systems inner membrane component.
 
 
  0.828
EIO_0784
Oligopeptide ABC transporter ATP-binding protein.
 
  0.827
EIO_1485
Binding-protein-dependent transport systems inner membrane component.
 
 
  0.825
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.