STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgCADP-glucose pyrophosphorylase. (398 aa)    
Predicted Functional Partners:
EIO_1960
Glycogen/starch synthase, ADP-glucose type.
 
 0.999
EIO_1959
1,4-alpha-glucan branching enzyme.
  
 0.994
EIO_1962
Glycogen debranching enzyme GlgX.
  
 0.994
pgm
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I.
 
  
 0.970
gtaB
UTP--glucose-1-phosphate uridylyltransferase.
     
 0.927
EIO_1958
Malto-oligosyltrehalose trehalohydrolase.
 
  
 0.920
argG
Argininosuccinate synthase.
  
  
 0.887
argC
N-acetyl-gamma-glutamyl-phosphate reductase.
  
  
 0.883
otsA
Alpha,alpha-trehalose-phosphate synthase.
    
 0.855
EIO_1395
Hydrolase arginase family.
   
 0.826
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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