Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
glgCADP-glucose pyrophosphorylase. (398 aa)    
Predicted Functional Partners:
EIO_1960
Glycogen/starch synthase, ADP-glucose type.
 
 0.999
EIO_1959
1,4-alpha-glucan branching enzyme.
  
 0.995
EIO_1962
Glycogen debranching enzyme GlgX.
  
 0.995
pgm
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I.
 
  
 0.961
EIO_1958
Malto-oligosyltrehalose trehalohydrolase.
 
  
 0.940
gtaB
UTP--glucose-1-phosphate uridylyltransferase.
     
 0.929
EIO_0054
Glucose-1-phosphate thymidylyltransferase.
    
 
0.901
argG
Argininosuccinate synthase.
  
  
 0.879
otsA
Alpha,alpha-trehalose-phosphate synthase.
     
 0.858
argC
N-acetyl-gamma-glutamyl-phosphate reductase.
  
  
 0.854
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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