STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1965Oxidoreductase. (297 aa)    
Predicted Functional Partners:
yxnA
Oxidoreductase yxnA.
 
 0.755
EIO_1966
Oxidoreductase yxnA.
 
 0.751
EIO_1964
Glycoside hydrolase 15-like protein.
 
     0.692
EIO_1958
Malto-oligosyltrehalose trehalohydrolase.
 
 
 0.608
EIO_0692
RNA polymerase, sigma 32 subunit, RpoH.
   
 0.562
EIO_0828
Ferredoxin.
   
 0.547
EIO_0690
Putative arylesterase (aryl-ester hydrolase).
 
 0.529
EIO_1880
Sulphate transporter.
   
 0.518
EIO_2212
Protein tyrosine/serine phosphatase.
    
  0.518
EIO_2269
NADH dehydrogenase subunit M.
   
  0.517
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.