close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1966Oxidoreductase yxnA. (260 aa)    
Predicted Functional Partners:
EIO_2520
Carveol dehydrogenase.
 
 0.808
EIO_1043
Short-chain dehydrogenase/reductase SDR.
 
 0.765
EIO_1644
Oxidoreductase yxjF.
 
 0.755
EIO_1965
Oxidoreductase.
 
 0.751
EIO_1807
3-hydroxybutyrate dehydrogenase type 2.
 
 0.745
EIO_1141
3-oxoacyl-(acyl-carrier-protein) reductase.
 
 0.731
EIO_1668
Estradiol 17-beta-dehydrogenase 8.
 
 0.731
EIO_1845
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein.
 
 0.729
EIO_0302
2-deoxy-D-gluconate 3-dehydrogenase.
 
 0.645
EIO_0556
Short chain dehydrogenase.
 
 0.610
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.