STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1975ABC-transport protein, inner membrane component. (314 aa)    
Predicted Functional Partners:
EIO_0294
Probable dipeptide transport system permease protein.
 
 0.967
EIO_1976
Binding-protein-dependent transport systems inner membrane component.
 
 0.967
EIO_1974
Extracellular solute-binding protein.
  0.930
EIO_2306
ABC transporter, membrane spanning protein (dipeptide).
 
 
  0.865
EIO_0783
Peptide ABC transporter permease.
 
 0.853
EIO_1519
Binding-protein-dependent transport systems inner membrane component.
 
 0.848
EIO_2308
Putative solute-binding component of ABC transporter.
 
  0.847
EIO_1439
Binding-protein-dependent transport systems inner membrane component.
 
 0.831
EIO_0739
Binding-protein-dependent transport systems inner membrane component.
 
 0.821
EIO_1451
Putative solute-binding component of ABC transporter.
 
  0.807
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.