STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1998Putative acetyltransferase. (193 aa)    
Predicted Functional Partners:
xanB
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
  
  
 0.593
EIO_2345
Aminotransferase, DegT/DnrJ/EryC1/StrS family.
  
  
 0.565
EIO_1868
Alpha amylase catalytic region.
 
  
 0.522
EIO_1995
Hypothetical protein.
       0.483
EIO_1996
Hypothetical protein.
       0.483
EIO_1997
Hypothetical protein.
       0.483
EIO_0808
Glycosyl transferase family 2.
  
  
 0.467
rnhB
Ribonuclease HII.
      0.428
EIO_1852
Putative bifunctional glycosyltransferase, forming beta-glycosyl and alpha-glycosyl linkages protein.
  
  
 0.402
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.