STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2013Gp5. (392 aa)    
Predicted Functional Partners:
EIO_2015
HK97 family phage portal protein.
 
 
 0.920
EIO_2014
Peptidase U35, phage prohead HK97.
 
  
 0.851
EIO_2016
Putative phage terminase large subunit.
 
   
 0.799
EIO_2011
Conserved hypothetical protein.
  
 
 0.776
EIO_2009
Conserved hypothetical protein.
   
   0.724
EIO_2012
phiE125 gp8 hypothetical protein.
       0.618
EIO_2010
Phage protein, HK97, gp10.
       0.601
EIO_2000
Conserved hypothetical protein.
 
     0.564
fsr
Major facilitator superfamily fosmidomycin resistant protein.
   
    0.547
EIO_1149
Phage portal protein, putative.
 
 
 0.523
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.