STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2014Peptidase U35, phage prohead HK97. (217 aa)    
Predicted Functional Partners:
EIO_1152
HK97 family major capsid protein.
  
 0.986
EIO_2015
HK97 family phage portal protein.
 
   
 0.884
EIO_2013
Gp5.
 
  
 0.851
EIO_1157
Major tail protein, TP901-1 family.
 
    0.821
EIO_1160
Putative phage tail minor protein.
 
    0.814
EIO_1148
Putative large terminase.
 
     0.810
EIO_1158
Conserved hypothetical protein.
 
     0.809
EIO_1149
Phage portal protein, putative.
 
   
 0.801
EIO_1155
Head-tail adaptor, putative.
 
   
 0.795
EIO_1161
Conserved hypothetical protein.
 
     0.790
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.