STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2017Hypothetical protein. (88 aa)    
Predicted Functional Partners:
EIO_0720
TonB-dependent receptor.
     
 0.523
EIO_0098
OmpA family protein.
   
 0.511
EIO_0491
OmpA domain protein.
   
 0.511
EIO_0576
OmpA domain protein.
   
 0.511
EIO_2136
OmpA/MotB family protein.
   
 0.510
EIO_0038
Hypothetical protein.
   
 0.504
EIO_1279
Hypothetical protein.
   
 0.504
EIO_1680
Organic solvent tolerance protein, putative.
     
 0.435
EIO_2221
Flagellar motor protein.
   
 
 0.432
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.