STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2018Nucleoside diphosphate kinase regulator. (129 aa)    
Predicted Functional Partners:
rpoC
DNA-directed RNA polymerase, beta' subunit.
  
 
 0.909
rpoB
DNA-directed RNA polymerase, beta subunit.
   
 
 0.840
rpoZ
DNA-directed RNA polymerase omega subunit.
   
 
 0.833
EIO_2572
DNA-directed RNA polymerase alpha subunit.
  
 
 0.833
EIO_1294
Inosine-5'-monophosphate dehydrogenase.
  
 
 0.589
rpsO
Ribosomal protein S15.
   
    0.589
EIO_1299
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/ 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase.
     
 0.529
EIO_2848
Polyribonucleotide nucleotidyltransferase.
  
  
 0.521
xanB
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
  
   
 0.441
EIO_2204
Bifunctional PutA protein.
      
 0.423
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.