STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2069Conserved hypothetical protein. (381 aa)    
Predicted Functional Partners:
EIO_2067
ABC transporter related protein.
 
 
  0.900
EIO_2068
Binding-protein-dependent transport systems inner membrane component.
 
 
  0.867
EIO_2063
Creatininase subfamily.
 
     0.795
EIO_2070
Methylenetetrahydrofolate dehydrogenase (NADP(+)).
     
 0.774
EIO_2073
FolD bifunctional protein.
     
 0.774
EIO_2071
Putative transcriptional regulator, IclR family; putative Pca regulon regulatory protein.
       0.773
EIO_2072
Putative transcriptional regulator PcaR, IclR family.
       0.773
EIO_2074
Conserved hypothetical protein.
       0.773
EIO_2075
Conserved hypothetical protein.
       0.773
EIO_2064
Cytosine deaminase.
 
     0.710
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.