STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2092tyrosyl-tRNA synthetase. (416 aa)    
Predicted Functional Partners:
pheT
phenylalanyl-tRNA synthetase, beta subunit.
  
  
 0.930
EIO_2263
arginyl-tRNA synthetase.
  
  
 0.869
ileS
isoleucyl-tRNA synthetase.
  
  
 0.838
EIO_2235
Conserved hypothetical protein.
 
   0.788
prfA
Peptide chain release factor 1.
 
  
 0.746
tsf
Translation elongation factor Ts.
 
 
 0.727
metG
methionyl-tRNA synthetase.
  
 0.725
EIO_2093
Ferric-uptake regulator.
       0.722
EIO_2094
Integral membrane protein, putative.
       0.721
EIO_0793
Peptide methionine sulfoxide reductase.
    
 0.705
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.