STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2134Probable cell cycle protein. (407 aa)    
Predicted Functional Partners:
EIO_2135
Tetratricopeptide TPR_2 repeat protein.
       0.845
EIO_2136
OmpA/MotB family protein.
   
   0.829
ftsH
ATP-dependent metalloprotease FtsH.
   
 0.747
tolB
Translocation protein TolB precursor.
 
   
 0.746
petA
Ubiquinol-cytochrome c reductase, iron-sulfur subunit.
    
  0.730
trmE
tRNA modification GTPase.
 
   
 0.666
EIO_0729
peptidyl-tRNA hydrolase.
 
  
 0.646
EIO_2138
Possible TolA protein.
  
    0.596
EIO_1985
ATPase central domain-containing protein.
 
   
 0.549
rplO
Ribosomal protein L15.
  
 
 
 0.547
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.