Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2139ExbD/TolR family protein. (156 aa)    
Predicted Functional Partners:
EIO_2140
MotA/TolQ/ExbB proton channel.
 
 
 0.985
exbB
tonB-system energizer ExbB.
 
 
 0.933
EIO_2197
ExbB family protein.
 
 
 0.926
EIO_2138
Possible TolA protein.
  
 
 0.920
tolB
Translocation protein TolB precursor.
 
  
 0.884
EIO_2136
OmpA/MotB family protein.
 
 
 
 0.816
EIO_2199
C-terminal TonB protein.
  
 
 0.728
EIO_0383
Tetratricopeptide TPR_2 repeat protein.
 
    0.715
EIO_2340
Energy transducer TonB.
  
 
 0.677
EIO_2141
Putative thioesterase.
  
  
 0.596
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.