STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2155Conserved hypothetical protein. (410 aa)    
Predicted Functional Partners:
EIO_1361
Possible peptidoglycan binding protein.
  
  
 0.781
guaA
GMP synthase.
     
 0.522
EIO_2156
Ser/Thr protein phosphatase/nucleotidase, putative.
       0.508
EIO_1256
Conserved hypothetical protein.
  
     0.498
otsA
Alpha,alpha-trehalose-phosphate synthase.
  
    0.478
tatC
Twin-arginine translocation protein TatC.
 
     0.478
EIO_0216
Phosphocarrier protein HPr.
       0.477
EIO_0217
PTS system fructose subfamily IIA component.
       0.477
EIO_0647
Riboflavin biosynthesis protein RibD.
       0.477
EIO_0793
Peptide methionine sulfoxide reductase.
       0.477
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.