STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2158Dihydroorotate dehydrogenase 2. (350 aa)    
Predicted Functional Partners:
pyrE
Orotate phosphoribosyltransferase.
 
 0.993
EIO_1399
Dihydroorotase, homodimeric type.
 
 
 0.989
EIO_0582
Amidohydrolase family, putative.
 
 0.984
carB
Carbamoyl-phosphate synthase large subunit.
 
 
 0.954
pyrB
Aspartate carbamoyltransferase.
 
  
 0.947
carA
Carbamoyl-phosphate synthase, small subunit.
 
  
 0.937
pyrF
Orotidine 5'-phosphate decarboxylase.
  
  
 0.923
EIO_1050
Dihydroorotase.
     
  0.900
pheT
phenylalanyl-tRNA synthetase, beta subunit.
  
  
 0.898
EIO_1010
Dihydropyrimidinase.
  
 
 0.844
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.