Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
EIO_2167Phosphopentomutase. (391 aa)    
Predicted Functional Partners:
deoA
Thymidine phosphorylase.
 
 
 0.998
EIO_2320
Deoxyribose-phosphate aldolase.
 
 
 0.973
EIO_0823
Ribose-5-phosphate isomerase A.
  
 
 0.968
EIO_2169
Cytidine deaminase.
 
   
 0.922
EIO_0934
Ribose-phosphate pyrophosphokinase.
     
 0.915
EIO_2112
Transketolase.
     
 0.915
EIO_0857
Purine nucleoside phosphorylase.
  
 
 0.914
trgB
Tellurite resistance protein TrgB.
    
  0.903
pgm
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I.
    
  0.901
rbsK
Ribokinase.
     
  0.900
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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