Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
aspAAspartate ammonia-lyase. (476 aa)    
Predicted Functional Partners:
EIO_0543
Asparaginase.
  
 
 0.947
ansB
L-asparaginase type II.
  
 
 0.947
EIO_0221
Phosphoenolpyruvate carboxykinase.
  
 
 0.919
EIO_1875
Aspartate racemase.
    
 0.915
EIO_2254
Adenylosuccinate lyase.
     
 0.910
EIO_0595
Argininosuccinate lyase.
     
0.905
EIO_0762
Adenylosuccinate synthetase.
     
 0.905
asaL
Argininosuccinate lyase 2.
     
0.905
EIO_1187
Aspartate aminotransferase.
    
 0.904
EIO_1890
Aspartate aminotransferase.
    
 0.904
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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