STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2209Histidinol-phosphate aminotransferase. (370 aa)    
Predicted Functional Partners:
hisB
Imidazoleglycerol-phosphate dehydratase.
 
 0.997
EIO_0915
Cyclohexadienyl dehydrogenase.
 
 
 0.979
hisD
Histidinol dehydrogenase.
  
 0.974
hisC
Histidinol-phosphate aminotransferase.
  
  
 
0.926
EIO_0026
4-hydroxyphenylpyruvate dioxygenase.
    
 0.924
EIO_0897
Prephenate dehydratase.
  
 
 0.922
EIO_0362
Aminotransferase, class IV.
  
 
 0.915
EIO_0673
Putative oxidoreductase protein.
  
 
 0.912
EIO_2328
Imidazole glycerol phosphate synthase.
 
  
 0.903
EIO_2293
Catalase/peroxidase HPI.
     
 0.902
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.