STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parEDNA topoisomerase IV, B subunit. (654 aa)    
Predicted Functional Partners:
EIO_2616
DNA topoisomerase IV subunit A.
 0.998
EIO_1546
DNA gyrase, A subunit.
 0.995
EIO_1547
DNA gyrase subunit A.
 0.995
EIO_2221
Flagellar motor protein.
  
 
 0.807
EIO_2224
Conserved hypothetical protein.
  
 
 0.796
EIO_2046
Zinc-binding protein.
    
 
 0.782
EIO_2430
Glutamine-pyruvate aminotransferase.
     
 0.686
recF
Recombination protein F.
  
 0.677
EIO_2841
Chaperone protein DnaK.
  
 
 0.669
EIO_2386
DNA polymerase III, beta subunit.
 
 0.649
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.