Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
nadEGlutamine-dependent NAD(+) synthetase. (554 aa)    
Predicted Functional Partners:
nadD
Nicotinic acid mononucleotide adenylyltransferase.
  
 
 0.967
ppnK
Probable inorganic polyphosphate/ATP-NAD kinase.
    
 0.964
pntB
NAD(P)+ transhydrogenase beta chain.
     
 0.939
pntA
NAD(P) transhydrogenase subunit alpha.
     
 0.910
mazG
MazG family protein.
    
  0.900
EIO_2855
Nicotinate phosphoribosyltransferase.
  
  
 0.760
EIO_2227
Morn repeat protein.
       0.728
EIO_0647
Riboflavin biosynthesis protein RibD.
     
 0.668
guaA
GMP synthase.
     
 0.668
EIO_1297
Competence/damage-inducible protein CinA domain protein.
     
 0.661
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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