STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_22385-formyltetrahydrofolate cyclo-ligase. (187 aa)    
Predicted Functional Partners:
EIO_1282
Phosphoribosylglycinamide formyltransferase.
  
 
 0.931
EIO_2070
Methylenetetrahydrofolate dehydrogenase (NADP(+)).
    
 0.912
EIO_2073
FolD bifunctional protein.
    
 0.912
folD
Bifunctional protein FolD 2.
    
 0.912
EIO_2239
Magnesium transporter.
       0.845
EIO_2236
Ser/Thr protein phosphatase family protein.
       0.711
EIO_2237
Conserved hypothetical protein.
       0.711
pheT
phenylalanyl-tRNA synthetase, beta subunit.
 
  
 0.668
EIO_0854
Rhomboid family protein.
  
    0.659
EIO_2240
Guanine deaminase.
       0.554
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.