Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2255Flagellar motor switch protein FliG. (341 aa)    
Predicted Functional Partners:
EIO_0367
Possible flagellar switch protein FliM.
 
 0.998
fliF
Flagellar M-ring protein FliF, putative.
 
 
 0.998
fliN
Flagellar motor switch protein fliN.
 
 0.998
fliQ
Flagellar biosynthetic protein FliQ.
 
 
 0.997
EIO_2427
Flagellar hook-associated protein.
 
  
 0.994
flgG
Flagellar basal-body rod protein FlgG.
 
 
 0.993
flgH
Flagellar L-ring protein FlgH.
  
 
 0.993
fliP
Flagellar biosynthesis protein FliP.
 
 
 0.993
EIO_2428
Flagellar hook protein FlgE.
 
 
 0.991
flgJ
Flagellar protein FlgJ, putative.
 
  
 0.990
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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