STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2260Beta-hexosamidase. (215 aa)    
Predicted Functional Partners:
EIO_0445
Putative glycosyl hydrolase.
  
  
  0.975
EIO_0275
Putative beta-N-acetylhexosaminidase protein.
  
  
 
0.911
EIO_1440
ROK family protein.
    
  0.901
EIO_1441
ROK family transcriptional regulator.
    
  0.901
EIO_2261
Beta-hexosamidase.
 
     0.851
EIO_2259
Segregation and condensation protein A.
  
    0.813
EIO_2262
Sporulation and cell division repeat protein.
  
    0.755
EIO_2258
Putative transcriptional regulator.
  
    0.754
EIO_2263
arginyl-tRNA synthetase.
  
    0.585
EIO_0735
Beta-lactamase.
 
  
 0.435
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.