Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EIO_2267biotin--acetyl-CoA-carboxylase ligase. (253 aa)    
Predicted Functional Partners:
EIO_2269
NADH dehydrogenase subunit M.
  
  
 0.930
EIO_2275
Respiratory-chain NADH dehydrogenase, subunit 1.
  
    0.907
nuoJ
NADH dehydrogenase subunit J.
  
    0.890
EIO_2268
NADH dehydrogenase subunit N.
  
    0.888
EIO_2276
NADH dehydrogenase (quinone), g subunit.
  
    0.888
EIO_2270
NADH dehydrogenase subunit L.
  
  
 0.878
EIO_2274
NADH dehydrogenase subunit I.
  
    0.862
EIO_2266
Metallo-beta-lactamase family protein.
      0.855
EIO_2272
NADH-ubiquinone oxidoreductase chain 4L.
       0.854
EIO_2526
acetyl-CoA carboxylase alpha chain / propionyl-CoA carboxylase alpha chain.
 
 0.837
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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