STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gphPhosphoglycolate phosphatase. (219 aa)    
Predicted Functional Partners:
EIO_2564
HAD-superfamily hydrolase, subfamily IA, variant 1.
  
  
 
0.923
EIO_0841
Glyoxylate reductase.
    
  0.901
rpe
Ribulose-phosphate 3-epimerase.
 
  
 0.857
glmU
UDP-N-acetylglucosamine pyrophosphorylase.
     
 0.694
EIO_2288
DNA alkylation repair enzyme superfamily protein.
       0.646
moaA
Molybdenum cofactor biosynthesis protein A.
  
    0.606
EIO_0894
HAD-superfamily hydrolase, subfamily IA, variant 3.
 
  
 0.581
EIO_2283
NADH dehydrogenase subunit C.
  
    0.558
nuoD
NADH dehydrogenase I, D subunit.
  
    0.546
EIO_2284
NADH-quinone oxidoreductase, B subunit.
  
    0.539
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.