STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2293Catalase/peroxidase HPI. (724 aa)    
Predicted Functional Partners:
amt-2
Aromatic amino acid aminotransferase.
     
 0.907
hisC
Histidinol-phosphate aminotransferase.
     
 0.902
EIO_2209
Histidinol-phosphate aminotransferase.
     
 0.902
EIO_1187
Aspartate aminotransferase.
     
  0.900
EIO_1890
Aspartate aminotransferase.
     
  0.900
EIO_2668
Putative GCN5-related N-acetyltransferase.
     
  0.900
EIO_0897
Prephenate dehydratase.
     
  0.800
EIO_1358
Superoxide dismutase, Fe.
    
 0.715
EIO_2292
Conserved hypothetical protein.
       0.558
EIO_2294
Transcriptional regulator, LysR family protein.
     
 0.556
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.