STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_23035-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase. (342 aa)    
Predicted Functional Partners:
metH
Probable 5-methyltetrahydrofolate--homocysteine methyltransferase.
  
 
 0.978
metK
S-adenosylmethionine synthetase.
  
 0.968
EIO_2775
Adenosylhomocysteinase.
  
 
 0.960
EIO_1037
O-succinylhomoserine sulfhydrylase.
  
 
 0.958
EIO_2301
Conserved hypothetical protein.
    0.942
EIO_2714
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
  
  
  0.919
EIO_0617
Aminotransferase, class I and II.
    
  0.901
metG
methionyl-tRNA synthetase.
     
 0.901
EIO_1794
Aspartate/tyrosine/aromatic aminotransferase protein.
    
  0.901
EIO_2792
GAF domain protein.
     
  0.900
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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