STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2306ABC transporter, membrane spanning protein (dipeptide). (257 aa)    
Predicted Functional Partners:
EIO_1972
Oligopeptide/dipeptide ABC transporter, ATPase subunit.
 
  0.964
EIO_1448
Oligopeptide/dipeptide ABC transporter ATP-binding protein.
 
  0.953
EIO_1483
Oligopeptide/dipeptide ABC transporter, ATP-binding protein.
 
  0.950
EIO_1501
ABC transporter, ATP-binding protein.
 
  0.945
EIO_1795
Oligopeptide/dipeptide ABC transporter, ATPase subunit.
 
  0.931
EIO_2307
ABC transporter, membrane spanning protein (dipeptide).
 
  0.930
EIO_1973
Oligopeptide/dipeptide ABC transporter, ATPase subunit.
 
  0.926
dppD1
Peptide ABC transporter ATP-binding protein.
 
  0.922
EIO_1500
ABC transporter, nucleotide binding/ATPase protein (oligopeptide).
    0.921
EIO_1796
Oligopeptide/dipeptide ABC transporter, ATPase subunit.
 
  0.910
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.