STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2317Conserved hypothetical protein. (55 aa)    
Predicted Functional Partners:
EIO_2319
Epimerase/dehydratase.
 
     0.569
EIO_1741
Conserved hypothetical protein.
  
     0.513
EIO_2318
FAD-dependent oxidoreductase domain-containing protein 1.
       0.504
EIO_1478
Conserved hypothetical protein.
  
     0.477
EIO_2315
Zinc metallopeptidases-like protein.
       0.412
EIO_2316
Transcriptional regulator, GntR family.
       0.412
EIO_0165
Hemin degrading factor.
 
  
 0.407
EIO_2620
Conserved hypothetical protein.
  
     0.406
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.