STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2345Aminotransferase, DegT/DnrJ/EryC1/StrS family. (165 aa)    
Predicted Functional Partners:
EIO_2670
dTDP-glucose 4,6-dehydratase.
 
  
 0.877
EIO_2344
Putative acetyl transferase protein.
 
  
 0.843
EIO_0054
Glucose-1-phosphate thymidylyltransferase.
 
  
 0.779
EIO_0454
Oxidoreductase domain protein.
  
  
 0.704
EIO_1433
Oxidoreductase protein.
  
  
 0.704
EIO_1852
Putative bifunctional glycosyltransferase, forming beta-glycosyl and alpha-glycosyl linkages protein.
  
  
 0.669
xanB
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
  
  
 0.654
EIO_0808
Glycosyl transferase family 2.
 
  
 0.632
EIO_1274
Putative acetyltransferase.
  
  
 0.565
EIO_1998
Putative acetyltransferase.
  
  
 0.565
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.