Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2346Lipopolysaccharide biosynthesis protein-like protein. (726 aa)    
Predicted Functional Partners:
EIO_1852
Putative bifunctional glycosyltransferase, forming beta-glycosyl and alpha-glycosyl linkages protein.
  
  
 0.752
trmE
tRNA modification GTPase.
   
    0.651
EIO_0808
Glycosyl transferase family 2.
 
  
 0.615
EIO_0054
Glucose-1-phosphate thymidylyltransferase.
 
  
 0.609
EIO_2669
dTDP-4-dehydrorhamnose 3,5-epimerase.
 
  
 0.574
EIO_0055
dTDP-4-dehydrorhamnose reductase.
 
  
 0.568
EIO_2347
Putative transporter.
       0.556
EIO_2348
Inosine-uridine preferring nucleoside hydrolase.
       0.556
EIO_0020
Lipopolysaccharide 3-alpha-galactosyltransferase.
  
  
 0.535
EIO_2343
Hypothetical protein.
 
  
 0.496
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.