Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2398Flagellar biosynthesis regulatory protein FlaF. (123 aa)    
Predicted Functional Partners:
flbT
Flagellin synthesis repressor protein FlbT, putative.
 
  
 0.999
EIO_2396
Flagellin protein.
 
  
 0.992
EIO_2397
Flagellin protein.
 
  
 0.992
EIO_2400
Flagellar protein, putative.
 
    0.977
flgJ
Flagellar protein FlgJ, putative.
 
    0.922
EIO_2427
Flagellar hook-associated protein.
 
  
 0.908
EIO_1557
Conserved hypothetical protein.
   
    0.903
EIO_2419
Conserved hypothetical protein.
  
    0.893
flbB
Flagellar basal-body rod protein FlgB, putative.
 
  
 0.892
EIO_2420
Flagellar basal body-associated protein FliL.
 
    0.883
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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