Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
flgGFlagellar basal-body rod protein FlgG. (261 aa)    
Predicted Functional Partners:
flbC
Flagellar basal-body rod protein FlgC.
 
 
 0.999
flgH
Flagellar L-ring protein FlgH.
 
 0.999
flgI
Flagellar P-ring protein.
 
 0.999
flbB
Flagellar basal-body rod protein FlgB, putative.
  
 
 0.998
fliQ
Flagellar biosynthetic protein FliQ.
 
 
 0.998
fliF
Flagellar M-ring protein FliF, putative.
 
 
 0.997
fliE
Flagellar hook-basal body protein FliE.
  
 
 0.994
EIO_2255
Flagellar motor switch protein FliG.
 
 
 0.993
fliP
Flagellar biosynthesis protein FliP.
 
 
 0.993
flgD
Flagellar hook capping protein, putative.
 
 
 0.992
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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