Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rpmG50S ribosomal protein L33. (55 aa)    
Predicted Functional Partners:
rpmB
50S ribosomal protein L28.
 
 
 0.997
rpoC
DNA-directed RNA polymerase, beta' subunit.
  
 
 0.995
rpsR
Ribosomal protein S18.
 
 
 0.992
rplL
Ribosomal protein L7/L12.
  
 
 0.991
rplM
Ribosomal protein L13.
  
 
 0.990
EIO_0418
50S ribosomal protein L21.
   
 
 0.989
rpmD
Ribosomal protein L30.
  
 
 0.989
rpsN
Ribosomal protein S14.
 
 
 0.989
rplJ
50S ribosomal protein L10.
  
 
 0.989
rpsC
30S ribosomal protein S3.
  
 
 0.988
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.