STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2471Oligopeptide ABC transporter, permease protein. (374 aa)    
Predicted Functional Partners:
EIO_2470
Alkaline phosphatase.
 
 0.996
EIO_2469
Extracellular solute-binding protein, family 5 precursor.
 
 0.994
EIO_2472
ABC transporter related protein.
 
  0.992
EIO_1483
Oligopeptide/dipeptide ABC transporter, ATP-binding protein.
 
  0.981
EIO_1482
Oligopeptide ABC transporter ATP binding protein.
 
  0.973
EIO_1713
Putative transport system permease protein.
 
 
 0.940
EIO_1448
Oligopeptide/dipeptide ABC transporter ATP-binding protein.
 
  0.928
dppD1
Peptide ABC transporter ATP-binding protein.
 
  0.923
EIO_1972
Oligopeptide/dipeptide ABC transporter, ATPase subunit.
 
  0.902
EIO_0280
ABC transporter related protein.
 
  0.884
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.