Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2471Oligopeptide ABC transporter, permease protein. (374 aa)    
Predicted Functional Partners:
EIO_2470
Alkaline phosphatase.
  0.996
EIO_2469
Extracellular solute-binding protein, family 5 precursor.
 
 
 0.992
EIO_2472
ABC transporter related protein.
 
  0.989
EIO_1448
Oligopeptide/dipeptide ABC transporter ATP-binding protein.
  0.923
dppD1
Peptide ABC transporter ATP-binding protein.
  0.918
EIO_1972
Oligopeptide/dipeptide ABC transporter, ATPase subunit.
  0.896
EIO_0292
ABC transporter ATP-binding component.
  0.893
EIO_0280
ABC transporter related protein.
 
  0.877
EIO_0784
Oligopeptide ABC transporter ATP-binding protein.
  0.862
EIO_1447
Oligopeptide/dipeptide ABC transporter ATP-binding protein.
  0.859
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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