STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2486Extracellular solute-binding protein. (412 aa)    
Predicted Functional Partners:
yurN
Probable sugar ABC transporter, permease protein.
 
 0.993
EIO_2484
Binding-protein-dependent transport systems inner membrane component.
 
 0.985
EIO_0514
Extracellular solute-binding protein.
  
  
 
0.927
EIO_2490
Putative cell surface polysaccharide export ABC-2 transporter permease protein.
     
  0.922
EIO_0516
Sugar ABC transporter, permease protein, ThuG.
 
 0.920
EIO_0515
Sugar-binding transport system permease protein.
 
  0.919
EIO_0518
ABC transporter related protein.
  
  0.901
EIO_1042
ABC transporter related protein.
  
  0.901
EIO_1935
Sugar ABC transporter.
  
  0.901
EIO_2083
ATP-binding transport protein smoK.
  
  0.901
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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