STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2524LamB/YcsF family protein. (256 aa)    
Predicted Functional Partners:
EIO_2528
Conserved hypothetical protein.
  
 0.997
EIO_1885
Conserved hypothetical protein.
 
 0.996
EIO_1884
Putative allophanate hydrolase subunit 2.
 
 0.993
EIO_1882
LamB/YcsF family protein.
  
  
 
0.910
EIO_0580
Glutamate/cysteine ligase.
     
  0.900
EIO_2305
Gamma-glutamyltransferase.
     
  0.900
EIO_2204
Bifunctional PutA protein.
   
 
  0.878
EIO_0752
Glutamine synthetase family protein.
   
 
  0.803
EIO_0754
Glutamine synthetase family protein.
   
 
  0.803
EIO_2253
Glutamine synthetase class-I.
   
 
  0.803
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.