STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2531Two-component hybrid sensor and regulator. (89 aa)    
Predicted Functional Partners:
pdhB
Pyruvate dehydrogenase subunit beta.
    
 0.974
EIO_2532
Integral membrane sensor signal transduction histidine kinase.
     0.822
EIO_2533
Two component transcriptional regulator.
 
 
 0.792
EIO_0934
Ribose-phosphate pyrophosphokinase.
  
 0.547
EIO_0113
Dihydrolipoamide acetyltransferase.
    
 0.511
sucB
Dihydrolipoamide succinyltransferase.
    
 0.511
EIO_1167
Branched-chain alpha-keto acid dehydrogenase E2 subunit.
    
 0.511
EIO_0111
Dihydrolipoamide dehydrogenase.
    
 0.507
EIO_0414
Dihydrolipoamide dehydrogenase.
    
 0.507
petR
DNA-binding response regulator PetR.
 
 
 0.481
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.