STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2562Glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein. (338 aa)    
Predicted Functional Partners:
EIO_2560
Glutamate/glutamine/aspartate/asparagine transport system permeaseprotein BztC.
 
 0.998
EIO_2561
ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztB.
 
 
 0.997
EIO_2559
ABC transporter related protein.
 
 0.996
EIO_0305
ABC transporter related protein.
 
 0.807
EIO_0758
ABC basic amino acid transporter, ATPase subunit.
 
 0.799
EIO_2563
ATP12 chaperone protein.
       0.650
EIO_2565
RluA family pseudouridine synthase.
       0.647
EIO_0304
Polar amino acid ABC transporter, inner membrane subunit.
 
 0.645
EIO_2566
CrcB-like protein.
       0.634
EIO_0303
Polar amino acid ABC transporter, inner membrane subunit.
 
 0.633
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.