STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2575Adenylate kinase. (219 aa)    
Predicted Functional Partners:
secY
Preprotein translocase SecY.
 
  
 0.995
rplO
Ribosomal protein L15.
 
  
 0.979
rpoC
DNA-directed RNA polymerase, beta' subunit.
  
 
 0.979
rpsK
30S ribosomal protein S11.
 
 0.976
rpsM
Ribosomal protein S13p/S18e.
  
 0.972
EIO_2584
Ribosomal protein L5.
 
  
 0.959
rpsE
30S ribosomal protein S5.
  
 0.957
rplF
50S ribosomal protein L6.
  
 0.957
EIO_2586
50S ribosomal protein L14.
 
 
 0.957
rplR
50S ribosomal protein L18.
 
  
 0.953
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.