Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
secEPreprotein translocase, SecE subunit. (66 aa)    
Predicted Functional Partners:
EIO_0761
Putative preprotein translocase.
 
 0.999
secY
Preprotein translocase SecY.
  
 0.998
EIO_2706
Translocase.
    
 0.997
oxaA
Inner membrane protein oxaA, putative.
  
 0.993
yajC
Preprotein translocase, YajC subunit.
   
 
 0.987
rplK
Ribosomal protein L11.
  
 
 0.981
nusG
Transcription termination/antitermination factor NusG.
  
  
 0.978
rplA
50S ribosomal protein L1.
  
 
 0.973
EIO_1035
Signal recognition particle-docking protein FtsY.
    
 0.968
rpmG
50S ribosomal protein L33.
  
 
 0.966
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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