Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2633Conserved hypothetical protein. (180 aa)    
Predicted Functional Partners:
mucS
Transcriptional regulator, MarR family protein.
  
     0.740
EIO_2632
Ribosomal RNA large subunit methyltransferase N.
       0.700
EIO_1753
Conserved hypothetical protein.
  
     0.682
EIO_2314
Conserved hypothetical protein.
  
    0.626
EIO_0188
Conserved hypothetical protein.
  
     0.623
EIO_0872
Conserved hypothetical protein.
  
     0.609
EIO_2678
HemY domain protein.
  
     0.588
EIO_2761
Transporter, Tim44 family protein.
  
     0.580
secE
Preprotein translocase, SecE subunit.
  
     0.548
EIO_0095
ATP synthase F0, B' subunit.
  
     0.512
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.