STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpBGlycerol-3-phosphate-binding periplasmic protein precursor ugpB. (440 aa)    
Predicted Functional Partners:
EIO_2662
Putative permease component of ABC transporter.
 
 0.992
ugpAc
Sn-glycerol-3-phosphate ABC transporter, permease protein.
 
 0.992
EIO_2661
ATP-binding protein, ABC-type glycerol-3-phosphate transporter.
  
  0.973
EIO_2665
Glycerophosphoryl diester phosphodiesterase.
  
  
 0.553
EIO_0518
ABC transporter related protein.
  
  0.528
EIO_1042
ABC transporter related protein.
  
  0.528
EIO_1867
ABC transporter related protein.
  
  0.528
EIO_1902
ABC transporter related protein.
  
  0.528
EIO_1935
Sugar ABC transporter.
  
  0.528
EIO_2083
ATP-binding transport protein smoK.
  
  0.528
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.