Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2812Conserved hypothetical protein. (403 aa)    
Predicted Functional Partners:
EIO_2813
Lipoprotein yjbH.
       0.671
EIO_2814
Conserved hypothetical protein.
       0.671
EIO_0372
Predicted oxidoreductase with FAD/NAD(P)-binding domain.
  
     0.636
EIO_2811
Conserved hypothetical protein.
       0.579
EIO_2809
three-deoxy-D-manno-octulosonic-acid transferase-like protein.
 
     0.509
EIO_2815
Hypothetical protein.
       0.464
EIO_2810
PmbA.
       0.460
lpxK
Tetraacyldisaccharide 4'-kinase.
       0.417
EIO_2808
3-deoxy-D-manno-octulosonic-acid.
       0.417
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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