Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIO_2826Conserved hypothetical protein. (207 aa)    
Predicted Functional Partners:
EIO_2212
Protein tyrosine/serine phosphatase.
  
     0.765
EIO_0417
Conserved hypothetical protein.
  
     0.717
EIO_2813
Lipoprotein yjbH.
  
    0.704
EIO_2819
Conserved hypothetical protein.
  
     0.689
EIO_2814
Conserved hypothetical protein.
  
     0.609
EIO_1680
Organic solvent tolerance protein, putative.
  
  
 0.591
EIO_2617
Conserved hypothetical protein.
  
     0.586
EIO_0916
Conserved hypothetical protein.
  
     0.584
EIO_2852
Possible monooxygenase.
  
     0.564
EIO_2279
Conserved hypothetical protein.
  
     0.562
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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